STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC1_1988Conserved hypothetical protein; Identified by match to protein family HMM PF00682 match to protein family HMM TIGR00973. (213 aa)    
Predicted Functional Partners:
folA
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
       0.718
cbs
Cystathionine beta-synthase; Identified by match to protein family HMM PF02491 match to protein family HMM PF06723 match to protein family HMM TIGR00904.
       0.508
RC1_2473
Conserved hypothetical protein.
  
    0.455
RC1_2619
Conserved domain protein.
  
    0.455
RC1_1986
Cystathionine gamma-synthase (CGS) (O-succinylhomoserine(Thiol)-lyase); Identified by match to protein family HMM PF04085 match to protein family HMM TIGR00219.
       0.423
RC1_1990
Hypothetical protein; Identified by Glimmer2 putative.
       0.419
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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