STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ohrOrganic hydroperoxide resistance protein; Identified by match to protein family HMM PF01565 match to protein family HMM PF02913. (141 aa)    
Predicted Functional Partners:
kat
Catalase; Identified by match to protein family HMM PF00444 match to protein family HMM TIGR01022.
  
  
 0.903
groS
Chaperonin GroS, putative; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
      
 0.735
RC1_0797
Conserved domain protein; Identified by match to protein family HMM PF00448; Belongs to the UPF0337 (CsbD) family.
  
  
 0.565
groL
Chaperonin GroL, putative; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
      
 0.547
dps
Dps family protein; Also called ferritin-like protein and DNA-binding stress protein; identified by match to protein family HMM PF06242; Belongs to the Dps family.
  
  
 0.528
dps-2
Dps family protein; Also called ferritin-like protein and DNA-binding stress protein; identified by match to protein family HMM PF00107 match to protein family HMM TIGR02824; Belongs to the Dps family.
  
  
 0.528
barA
Signal transduction histidine-protein kinase BarA; Identified by match to protein family HMM PF01887.
   
  
 0.502
RC1_1332
SmpA; Identified by match to protein family HMM PF03061 match to protein family HMM TIGR00369.
   
  
 0.466
ohrR
Organic hydroperoxide resistance transcriptionalregulator; Identified by match to protein family HMM PF00535.
  
 0.462
RC1_4044
Transcriptional regulator, MarR family protein; Identified by match to protein family HMM TIGR01444.
  
 0.449
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.