STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anrTranscriptional activator protein Anr; Also contains PF00325. (245 aa)    
Predicted Functional Partners:
ompW
Outer membrane protein OmpW, putative; Identified by match to protein family HMM PF00732 match to protein family HMM PF05199.
 
  
 0.819
hemN
[Synonyms] Coproporphyrinogenase Coprogen oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.813
hemN-2
Oxygen-independent coproporphyrinogen-III oxidase, putative; [synonyms] Coproporphyrinogenase Coprogen oxidase identified by match to protein family HMM PF00593 match to protein family HMM PF07660 match to protein family HMM PF07715.
  
  
 0.813
nifB
FeMo cofactor biosynthesis protein nifB.
  
  
 0.748
aer-2
Aerotaxis sensor receptor Aer; Gene symbol synonym air; identified by match to protein family HMM PF02633.
   
 
 0.733
nosZ
Nitrous oxide reductase NosZ; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
   
  
 0.727
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
 
 0.725
aer-3
Aerotaxis sensor receptor Aer; Gene symbol synonym air.
   
 
 0.723
phbC
[synonyms] (Poly(3-hydroxybutyrate) polymerase) (PHB polymerase) (PHB synt Hase) (Poly(3-hydroxyalkanoate) polymerase).
      
 0.720
ahpD
Alkyl hydroperoxide reductase D; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
      
 0.716
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.