STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadBL-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (568 aa)    
Predicted Functional Partners:
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
 
 0.999
nadC
Nicotinate-nucleotide pyrophosphorylase; Identified by match to protein family HMM PF00501; Belongs to the NadC/ModD family.
  
 0.999
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.918
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.918
RC1_0431
Aspartate racemase, putative; Belongs to the aspartate/glutamate racemases family.
     
 0.901
pyrB
Aspartate carbamoyltransferase; Identified by match to protein family HMM PF01464; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.901
aspG
L-asparaginase, putative; Identified by match to protein family HMM PF00196.
     
  0.900
asnB
Asparagine synthase (glutamine-hydrolyzing).
     
  0.900
asnB-2
Asparagine synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00873 match to protein family HMM TIGR00915.
     
  0.900
asnB-3
Asparagine synthase (glutamine-hydrolyzing), putative; Identified by match to protein family HMM PF00483.
     
  0.900
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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