Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RC1_3136Amidohydrolase family protein. (559 aa)    
Predicted Functional Partners:
RC1_3001
FxsA cytoplasmic membrane protein; Identified by match to protein family HMM PF00795 match to protein family HMM TIGR00546.
  
  
 0.803
RC1_3137
Hypothetical protein; Identified by Glimmer2 putative.
       0.773
RC1_3175
Acylaminoacyl peptidase, putative; HMMs are not matching the homologs; Relied on the several uncharacterized homologs identified as acylaminoacyl peptidase.
 
     0.671
RC1_0865
Identified by match to protein family HMM PF05401 match to protein family HMM PF07719 match to protein family HMM PF07721.
  
     0.606
xaa
Amidohydrolase family protein; PF01979 Has some homologs With the same identity; Shared homology With Xaa-Pro dipeptidase GB:BAA77794.1 shows that the gene Has been cloned and expressed (PUBMED: 9989239); identified by match to protein family HMM PF05860 match to protein family HMM PF07581 match to protein family HMM TIGR01901.
  
     0.589
fucA
L-fuculose phosphate aldolase.
       0.511
RC1_3134
Conserved hypothetical protein.
       0.471
RC1_0392
Prolyl oligopeptidase family protein, putative.
 
     0.428
RC1_1879
Prolyl oligopeptidase family, putative; PF00326.
 
     0.412
RC1_3605
Characterized L-allo-threonine aldolase.SP:O07051: L-allo-threonine aldolase (L-allo-TA)(L-allo-threonineacetaldehyde-lyase); identified by match to protein family HMM PF00587 match to protein family HMM PF03129 match to protein family HMM TIGR00442.
  
     0.411
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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