STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltBGlutamate synthase, large subunit. (1518 aa)    
Predicted Functional Partners:
RC1_2759
Conserved hypothetical protein; Identified by match to protein family HMM PF00529.
  
 
 0.999
gltD
Glutamate synthase, small subunit; Identified by match to protein family HMM PF00291 match to protein family HMM PF01842 match to protein family HMM TIGR01127.
 0.999
RC1_1776
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.996
glnA
Glutamine synthetase, type I.
  
 
 0.987
RC1_1465
Glutamine synthetase, putative; Identified by match to protein family HMM PF00106 match to protein family HMM PF07993; Belongs to the glutamine synthetase family.
  
 
 0.987
puuA
[synonyms] Gamma-Glu-Put synthetase Glutamate--putrescine ligase identified by match to protein family HMM PF02633.
  
 
 0.987
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.972
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing], putative.
   
 0.960
aatA
Aspartate aminotransferase A; Synonym identified by match to protein family HMM PF00593 match to protein family HMM PF07715.
    
 0.956
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
    
 0.955
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.