cas2-2 protein (Rhodospirillum centenum) - STRING interaction network

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cas2-2

CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467. (98 aa)

Predicted Functional Partners:

cas1

0.951

RC1_3339

0.776

RC1_3336

0.769

cas3

0.767

RC1_3337

0.761

RC1_3335

0.704

RC1_1102

0.510

Your Current Organism:

Rhodospirillum centenum

NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RC1_1102	RC1_3339	RC1_1102	RC1_3339	Phage-related hypothetical protein; Part of the putative prophage RcenMu genome.	CRISPR-associated protein, CT1972 family.	0.533
RC1_1102	cas2-2	RC1_1102	RC1_3333	Phage-related hypothetical protein; Part of the putative prophage RcenMu genome.	CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467.	0.510
RC1_3335	RC1_3336	RC1_3335	RC1_3336	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	0.981
RC1_3335	RC1_3337	RC1_3335	RC1_3337	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	0.965
RC1_3335	RC1_3339	RC1_3335	RC1_3339	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein, CT1972 family.	0.963
RC1_3335	cas1	RC1_3335	RC1_3334	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein Cas1, putative; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.853
RC1_3335	cas2-2	RC1_3335	RC1_3333	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467.	0.704
RC1_3335	cas3	RC1_3335	RC1_3340	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated helicase Cas3, putative.	0.923
RC1_3336	RC1_3335	RC1_3336	RC1_3335	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	0.981
RC1_3336	RC1_3337	RC1_3336	RC1_3337	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	0.999
RC1_3336	RC1_3339	RC1_3336	RC1_3339	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein, CT1972 family.	0.999
RC1_3336	cas1	RC1_3336	RC1_3334	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein Cas1, putative; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.889
RC1_3336	cas2-2	RC1_3336	RC1_3333	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467.	0.769
RC1_3336	cas3	RC1_3336	RC1_3340	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated helicase Cas3, putative.	0.988
RC1_3337	RC1_3335	RC1_3337	RC1_3335	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	0.965
RC1_3337	RC1_3336	RC1_3337	RC1_3336	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	0.999
RC1_3337	RC1_3339	RC1_3337	RC1_3339	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein, CT1972 family.	0.999
RC1_3337	cas1	RC1_3337	RC1_3334	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein Cas1, putative; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.906
RC1_3337	cas2-2	RC1_3337	RC1_3333	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467.	0.761
RC1_3337	cas3	RC1_3337	RC1_3340	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated helicase Cas3, putative.	0.990

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