cas2-2 protein (Rhodospirillum centenum) - STRING interaction network

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cas2-2

CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467. (98 aa)

Predicted Functional Partners:

cas1

0.951

RC1_3339

0.780

RC1_3336

0.773

cas3

0.770

RC1_3337

0.766

RC1_3335

0.706

RC1_1102

0.510

Your Current Organism:

Rhodospirillum centenum

NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RC1_1102	RC1_3339	RC1_1102	RC1_3339	Phage-related hypothetical protein; Part of the putative prophage RcenMu genome.	CRISPR-associated protein, CT1972 family.	0.533
RC1_1102	cas2-2	RC1_1102	RC1_3333	Phage-related hypothetical protein; Part of the putative prophage RcenMu genome.	CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467.	0.510
RC1_3335	RC1_3336	RC1_3335	RC1_3336	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	0.981
RC1_3335	RC1_3337	RC1_3335	RC1_3337	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	0.964
RC1_3335	RC1_3339	RC1_3335	RC1_3339	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein, CT1972 family.	0.961
RC1_3335	cas1	RC1_3335	RC1_3334	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein Cas1, putative; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.847
RC1_3335	cas2-2	RC1_3335	RC1_3333	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467.	0.706
RC1_3335	cas3	RC1_3335	RC1_3340	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	CRISPR-associated helicase Cas3, putative.	0.925
RC1_3336	RC1_3335	RC1_3336	RC1_3335	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	0.981
RC1_3336	RC1_3337	RC1_3336	RC1_3337	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	0.998
RC1_3336	RC1_3339	RC1_3336	RC1_3339	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein, CT1972 family.	0.997
RC1_3336	cas1	RC1_3336	RC1_3334	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein Cas1, putative; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.893
RC1_3336	cas2-2	RC1_3336	RC1_3333	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467.	0.773
RC1_3336	cas3	RC1_3336	RC1_3340	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	CRISPR-associated helicase Cas3, putative.	0.981
RC1_3337	RC1_3335	RC1_3337	RC1_3335	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein, CT1974 family; Identified by match to protein family HMM PF00353 match to protein family HMM PF01839.	0.964
RC1_3337	RC1_3336	RC1_3337	RC1_3336	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein, CT1976 family; Identified by match to protein family HMM PF00912 match to protein family HMM TIGR02070.	0.998
RC1_3337	RC1_3339	RC1_3337	RC1_3339	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein, CT1972 family.	0.998
RC1_3337	cas1	RC1_3337	RC1_3334	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein Cas1, putative; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.	0.904
RC1_3337	cas2-2	RC1_3337	RC1_3333	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated protein Cas2, putative; Identified by match to protein family HMM PF01921 match to protein family HMM TIGR00467.	0.766
RC1_3337	cas3	RC1_3337	RC1_3340	CRISPR-associated protein, CT1975 family; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518.	CRISPR-associated helicase Cas3, putative.	0.981

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