Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RC1_2445 | RC1_3507 | RC1_2445 | RC1_3507 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | 0.595 |
| RC1_2445 | RC1_3508 | RC1_2445 | RC1_3508 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Conserved hypothetical protein. | 0.911 |
| RC1_2445 | ccoP | RC1_2445 | RC1_1277 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.972 |
| RC1_2445 | coxA | RC1_2445 | RC1_0781 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c oxidase, subunit I (Heme/copper-type cytochrome/quinol oxidase); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.968 |
| RC1_2445 | coxB | RC1_2445 | RC1_0780 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c oxidase subunit II (Heme/copper-type cytochrome/quinol oxidase); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.955 |
| RC1_2445 | coxC | RC1_2445 | RC1_3635 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c oxidase polypeptide III identified by match to protein family HMM PF01212. | 0.990 |
| RC1_2445 | ctaC | RC1_2445 | RC1_3630 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c oxidase, subunit II (Heme/copper-type cytochrome/quinol oxidases); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.955 |
| RC1_2445 | ctaD | RC1_2445 | RC1_3631 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome c oxidase, subunit I (Heme/copper-type cytochrome/quinol oxidases); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.968 |
| RC1_2445 | petA | RC1_2445 | RC1_3422 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | ubiquinol-Cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.900 |
| RC1_2445 | petB | RC1_2445 | RC1_3423 | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| RC1_3507 | RC1_2445 | RC1_3507 | RC1_2445 | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.595 |
| RC1_3507 | RC1_3508 | RC1_3507 | RC1_3508 | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | Conserved hypothetical protein. | 0.941 |
| RC1_3507 | coxA | RC1_3507 | RC1_0781 | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | Cytochrome c oxidase, subunit I (Heme/copper-type cytochrome/quinol oxidase); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.510 |
| RC1_3507 | coxB | RC1_3507 | RC1_0780 | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | Cytochrome c oxidase subunit II (Heme/copper-type cytochrome/quinol oxidase); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.902 |
| RC1_3507 | coxC | RC1_3507 | RC1_3635 | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | Cytochrome c oxidase polypeptide III identified by match to protein family HMM PF01212. | 0.493 |
| RC1_3507 | ctaC | RC1_3507 | RC1_3630 | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | Cytochrome c oxidase, subunit II (Heme/copper-type cytochrome/quinol oxidases); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.914 |
| RC1_3507 | ctaD | RC1_3507 | RC1_3631 | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | Cytochrome c oxidase, subunit I (Heme/copper-type cytochrome/quinol oxidases); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.510 |
| RC1_3507 | petA | RC1_3507 | RC1_3422 | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | ubiquinol-Cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.597 |
| RC1_3508 | RC1_2445 | RC1_3508 | RC1_2445 | Conserved hypothetical protein. | Rieske iron-sulfur protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.911 |
| RC1_3508 | RC1_3507 | RC1_3508 | RC1_3507 | Conserved hypothetical protein. | Sco1; Identified by match to protein family HMM PF00317 match to protein family HMM PF02867 match to protein family HMM TIGR02506. | 0.941 |
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