Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RC1_2401 | dme | RC1_2401 | RC1_0405 | Pyruvate kinase; Belongs to the pyruvate kinase family. | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | 0.991 |
| RC1_2401 | eno | RC1_2401 | RC1_0117 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphopyruvate hydratase, putative; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.989 |
| RC1_2401 | pckA | RC1_2401 | RC1_2822 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.973 |
| RC1_2401 | pdhA | RC1_2401 | RC1_0119 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.923 |
| RC1_2401 | pdhB | RC1_2401 | RC1_0120 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.948 |
| RC1_2401 | ppc | RC1_2401 | RC1_2446 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.973 |
| RC1_2401 | ppdK | RC1_2401 | RC1_1667 | Pyruvate kinase; Belongs to the pyruvate kinase family. | [synonyms] pyruvate, orthophosphate dikinase identified by match to protein family HMM PF01451; Belongs to the PEP-utilizing enzyme family. | 0.972 |
| RC1_2401 | ppsA | RC1_2401 | RC1_3562 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate synthase, putative; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.972 |
| RC1_2401 | pyk | RC1_2401 | RC1_2135 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate kinase; Identified by match to protein family HMM PF00148 match to protein family HMM TIGR01279; Belongs to the pyruvate kinase family. | 0.944 |
| RC1_2401 | tme | RC1_2401 | RC1_3260 | Pyruvate kinase; Belongs to the pyruvate kinase family. | NADP-dependent malic enzyme; Synonym gene name 'maeB' from E.coli identified by match to protein family HMM PF00392 match to protein family HMM PF07702 match to protein family HMM TIGR02018. | 0.991 |
| dme | RC1_2401 | RC1_0405 | RC1_2401 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.991 |
| dme | eno | RC1_0405 | RC1_0117 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | Phosphopyruvate hydratase, putative; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.549 |
| dme | pckA | RC1_0405 | RC1_2822 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.900 |
| dme | pdhA | RC1_0405 | RC1_0119 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.969 |
| dme | pdhB | RC1_0405 | RC1_0120 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.992 |
| dme | ppc | RC1_0405 | RC1_2446 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.807 |
| dme | ppdK | RC1_0405 | RC1_1667 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | [synonyms] pyruvate, orthophosphate dikinase identified by match to protein family HMM PF01451; Belongs to the PEP-utilizing enzyme family. | 0.981 |
| dme | ppsA | RC1_0405 | RC1_3562 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | Phosphoenolpyruvate synthase, putative; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.981 |
| dme | pyk | RC1_0405 | RC1_2135 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | Pyruvate kinase; Identified by match to protein family HMM PF00148 match to protein family HMM TIGR01279; Belongs to the pyruvate kinase family. | 0.991 |
| dme | tme | RC1_0405 | RC1_3260 | NAD-dependent malic enzyme; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028. | NADP-dependent malic enzyme; Synonym gene name 'maeB' from E.coli identified by match to protein family HMM PF00392 match to protein family HMM PF07702 match to protein family HMM TIGR02018. | 0.952 |
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