STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC1_3745Multidrug resistance protein, SMR family; Identified by match to protein family HMM PF07883. (109 aa)    
Predicted Functional Partners:
flgF
Flagellar basal-body rod protein FlgF; Gene symbol synonym flaC.Rod protein transmission shaft periplasmic space; identified by match to protein family HMM PF00691; Belongs to the flagella basal body rod proteins family.
    
   0.514
flgF-2
Flagellar basal-body rod protein FlgF; Gene symbol synonym flaC.Rod protein transmission shaft periplasmic space; identified by match to protein family HMM PF00204 match to protein family HMM PF00986 match to protein family HMM PF01751 match to protein family HMM PF02518 match to protein family HMM TIGR01055; Belongs to the flagella basal body rod proteins family.
    
   0.514
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.437
RC1_3744
Conserved hypothetical protein; Identified by match to protein family HMM PF02538.
       0.405
adeS
Two component sensor histidine kinase AdeS, putative; Identified by match to protein family HMM PF01266.
       0.405
adeR
DNA-binding response regulator AdeR, putative; Contains PF00072 identified by match to protein family HMM PF01244.
  
    0.403
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.