STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sqrSulfide-quinone reductase. (435 aa)    
Predicted Functional Partners:
cysI
Sulfite reductase.
     
 0.916
RC1_0523
Cys.
   
  0.906
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
   
  0.906
RC1_0467
NAD-binding flavodoxin, putative; Identified by match to protein family HMM TIGR01494.
     
 0.905
cysK
Cysteine synthase A; O-acetylserine sulfhydrylase,O-acetylserine (Thiol)-lyase identified by match to protein family HMM PF01578 match to protein family HMM TIGR00353.
     
 0.902
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
    
   0.768
RC1_2563
Conserved hypothetical protein; Identified by match to protein family HMM PF01061.
 
   
 0.747
RC1_2565
AcrB; Identified by match to protein family HMM PF00512 match to protein family HMM PF02518; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.709
RC1_2564
Efflux transporter, RND family, MFP subunit, putative; Identified by match to protein family HMM PF00005; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.532
RC1_2452
Cytochrome c fa.
 
   
 0.530
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.