STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrSNnrS protein; Identified by match to protein family HMM PF04279. (400 aa)    
Predicted Functional Partners:
nosR
Nitrous oxide reductase regulatory protein NosR.
 
  
 0.651
norB
Nitric oxide reductase NorB, putative.
 
  
 0.638
nnrR
Nitrite and nitric oxide reductase regulator; Contains cyclic nucleotide-binding domain identified by match to protein family HMM PF00106 match to protein family HMM PF01370.
 
   
 0.595
RC1_0934
Protease, putative; PF01136 identified by match to protein family HMM PF02470.
 
    0.584
nosZ
Nitrous oxide reductase NosZ; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
   
 0.569
ytfE
Regulator of cell morphogenesis and NO signaling, putative; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
  
 0.561
RC1_3979
Hypothetical protein; Identified by Glimmer2 putative.
       0.550
RC1_0935
Peptidase, U32 family, putative; PF01136 Has uncharacterized homologs.
 
    0.527
RC1_0936
No HMMs and With conserved hypothetical homologs; identified by match to protein family HMM PF03588 match to protein family HMM TIGR00667.
 
     0.512
nosD
Periplasmic copper-binding protein, NosD; Identified by match to protein family HMM PF01339 match to protein family HMM PF01739 match to protein family HMM PF03705.
 
  
 0.512
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.