STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbF-2Glucose-1-phosphate cytidylyltransferase, putative; Part of a rfb operon; identified by match to protein family HMM PF03167 match to protein family HMM TIGR00758. (273 aa)    
Predicted Functional Partners:
rfbG
CDP-glucose 4,6-dehydratase, putative; Part of an rfb operon; identified by match to protein family HMM PF00072 match to protein family HMM PF00486.
 
 0.987
RC1_3987
dTDP-4-dehydrorhamnose 3,5-epimerase, putative; [Synonyms] dTDP-4-keto-6-deoxyglucose 3,5-epimerase dTDP-L-rhamnose synthetase identified by match to protein family HMM PF07396.
  
  
 0.959
rfbF-3
Glucose-1-phosphate cytidylyltransferase, putative.
 
 
0.931
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.928
galU
UTP-glucose-1-phosphate uridylyltransferase; Also called UDP-glucose pyrophosphorylase Alpha-D-glucosyl-1-phosphate uridylyltransferaseUridine diphosphoglucose pyrophosphorylase; Gene symbol synonym exoN, celA.
    
 0.920
malQ
4-alpha-glucanotransferase; SynonymDisproportionating enzyme D-enzyme.
    
 0.915
treZ
Probable maltokinase; Identified by match to protein family HMM PF00124 match to protein family HMM TIGR01157; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.907
rfbF
Glucose-1-phosphate cytidylyltransferase, putative; Part of an rfb operon, see SP identified by match to protein family HMM PF00529 match to protein family HMM TIGR01730.
 
 
 
0.905
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.901
RC1_0233
Capsular polysaccharide biosynthesis protein I, putative; Identified by match to protein family HMM PF00128 match to protein family HMM PF02922 match to protein family HMM TIGR02100.
  
 0.880
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.