STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfLElectron transfer flavoprotein, alpha subunit; SynonymsetfL Has paralog fixB. (313 aa)    
Predicted Functional Partners:
RC1_3182
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
fixA
Electron transfer flavoprotein, beta subunit FixA (essential for nitrogen fixation); fixA and fixB are paralogous to two electron transfer flavoprotein genes etfS, etfL identified by match to protein family HMM PF00361.
 0.999
etfS
Electron transfer flavoprotein beta subunit; SynonymsetfS Has paralog fixA identified by match to protein family HMM PF00056 match to protein family HMM PF02866 match to protein family HMM TIGR01763.
 0.999
fixX
Ferredoxin-like protein, FixX; Could be a 3Fe-4S cluster-containing protein.
  
 0.972
RC1_1349
acyl-CoA dehydrogenase.
 
 0.921
RC1_0378
acyl-CoA dehydrogenase.
 
 0.906
ivd2
isovaleryl-CoA dehydrogenase; Identified by match to protein family HMM PF00108 match to protein family HMM PF02803 match to protein family HMM TIGR01930.
 
 0.905
RC1_3534
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF03775 match to protein family HMM PF05209 match to protein family HMM TIGR01222.
 
 0.903
pdhB
Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.883
RC1_1632
acyl-CoA dehydrogenase, putative; Identified by match to protein family HMM PF00111.
 
 0.859
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.