Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFK34011.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
SFL97685.1
Hypothetical protein.
  
     0.767
SFL66066.1
Multidrug resistance efflux pump.
  
  
  0.753
SFL74817.1
Hypothetical protein.
  
     0.751
SFK96027.1
Hypothetical protein.
  
     0.749
SFL97737.1
Hypothetical protein.
  
     0.746
SFK76692.1
Hypothetical protein.
  
     0.738
SFK92812.1
Hypothetical protein.
  
     0.720
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.720
SFK37164.1
Hypothetical protein.
  
     0.717
SFL35098.1
Heparinase II/III-like protein.
  
     0.713
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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