Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFK35598.1TonB family C-terminal domain-containing protein. (149 aa)    
Predicted Functional Partners:
SFK65336.1
Biopolymer transport protein TolR.
  
 0.913
SFL12687.1
Cell division and transport-associated protein TolR.
  
 0.913
SFK65358.1
Cell division and transport-associated protein TolQ.
  
 0.884
tolQ
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.884
SFK32317.1
Outer membrane receptor proteins, mostly Fe transport.
  
 0.787
SFK34890.1
Iron complex outermembrane recepter protein.
  
 0.787
SFL01100.1
Iron complex outermembrane recepter protein.
  
 0.787
SFL40006.1
Iron complex outermembrane recepter protein.
  
 0.787
SFL89526.1
Vitamin B12 transporter.
  
 0.787
SFL36095.1
Outer membrane receptor proteins, mostly Fe transport.
   
 0.764
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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