Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFK36387.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SFK36412.1
Cold shock protein (beta-ribbon, CspA family).
       0.529
SFK75167.1
Hypothetical protein.
  
     0.498
SFK36357.1
Hypothetical protein.
       0.467
SFL83552.1
Glucokinase; Belongs to the bacterial glucokinase family.
     
  0.467
SFL76978.1
Hypothetical protein.
 
     0.466
SFL71770.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
     0.465
SFK31852.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
     0.464
SFL31699.1
Ferritin-like metal-binding protein YciE.
  
     0.458
SFK79184.1
Head-tail adaptor.
  
     0.454
SFL72275.1
Ferritin-like metal-binding protein YciE.
  
     0.454
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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