STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK38244.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (223 aa)    
Predicted Functional Partners:
SFL38841.1
PAS domain S-box-containing protein.
 
 0.990
SFL71628.1
PAS domain S-box-containing protein.
 
0.988
SFK92251.1
PAS domain S-box-containing protein.
 
 0.979
SFK76788.1
PAS domain S-box-containing protein.
 
0.974
SFL28865.1
PAS domain S-box-containing protein.
 
0.974
SFL63346.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
 0.972
SFK38219.1
Signal transduction histidine kinase.
 0.969
SFK88657.1
PAS domain S-box-containing protein.
 0.968
SFL06486.1
PAS domain S-box-containing protein.
 0.956
SFK65572.1
PAS domain S-box-containing protein.
 
 0.946
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.