Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
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Co-expression
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[Homology]
Score
SFK28345.1ATP-binding cassette, subfamily B, RaxB. (725 aa)    
Predicted Functional Partners:
SFK28371.1
Membrane fusion protein.
 
 0.989
SFK84436.1
HlyD family secretion protein.
 
 0.855
SFL85221.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
   
  0.821
SFK85147.1
Outer membrane protein.
  
 
 0.818
SFL52644.1
HlyD family secretion protein.
  
 0.809
SFL93208.1
HlyD family secretion protein.
  
 0.809
SFL66066.1
Multidrug resistance efflux pump.
 
 0.780
SFK84359.1
Biotin-lipoyl like.
  
 0.761
SFK31335.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.741
SFL07602.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.741
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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