Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFK56364.1Transglutaminase-like enzyme, putative cysteine protease. (298 aa)    
Predicted Functional Partners:
SFK56412.1
Uncharacterized conserved protein, Alpha-E superfamily.
  
 0.936
SFK56342.1
Putative proteasome-type protease.
 
    0.908
SFL02330.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
 0.906
SFK56434.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
    0.898
SFK33113.1
Predicted extracellular nuclease.
    
  0.878
SFL53157.1
Transglutaminase-like enzyme, putative cysteine protease.
 
     0.772
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.766
SFL53369.1
Transglutaminase-like enzyme, putative cysteine protease.
 
     0.664
SFK69355.1
Transglutaminase-like enzyme, putative cysteine protease.
 
     0.657
SFK39295.1
Catalase.
   
   0.587
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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