STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK56434.1Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily. (479 aa)    
Predicted Functional Partners:
SFK56412.1
Uncharacterized conserved protein, Alpha-E superfamily.
  
 0.986
SFL45360.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
   
  0.911
SFL28795.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
   
  0.906
SFK56364.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.878
SFL02330.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
0.856
SFL02350.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.847
SFK56342.1
Putative proteasome-type protease.
 
  
 0.839
SFL53157.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    0.824
SFL53369.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    0.735
SFK69355.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    0.733
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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