Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
SFK57739.1Alginate lyase. (327 aa)    
Predicted Functional Partners:
SFL08466.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.757
SFL30624.1
Hypothetical protein.
 
 
 0.671
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.666
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
  0.633
SFL91746.1
Cadherin-like.
  
 
 0.613
SFK57698.1
Gamma-glutamylmethylamide synthetase; Belongs to the glutamine synthetase family.
    
  0.578
SFK79336.1
TIGR02217 family protein.
   
   0.569
SFK79367.1
Phage conserved hypothetical protein BR0599.
   
   0.569
SFK33113.1
Predicted extracellular nuclease.
    
 0.539
SFK57620.1
N-methylglutamate synthase subunit A.
    
  0.497
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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