Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFK57810.1Hypothetical protein. (338 aa)    
Predicted Functional Partners:
SFM04582.1
Acyl transferase domain-containing protein.
  
 0.936
SFL93294.1
Acyl transferase domain-containing protein.
  
 0.729
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
   0.659
SFM06773.1
2OG-Fe(II) oxygenase superfamily protein.
    
   0.633
SFL74767.1
2,5-diketo-D-gluconate reductase A.
   
 
 0.609
SFL80473.1
Aldo/keto reductase.
   
 
 0.609
SFL85706.1
Aldo/keto reductase.
   
 
 0.609
SFL83529.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.572
SFK57842.1
Protein of unknown function.
       0.568
SFL62442.1
NADPH:quinone reductase.
 
 0.561
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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