Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SFK58235.1Tautomerase enzyme. (129 aa)    
Predicted Functional Partners:
SFK51764.1
Glyoxalase family protein.
    
 0.740
SFK58420.1
Glyoxalase family protein.
    
 0.740
SFK58264.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
       0.514
betI
Transcriptional regulator, TetR family; Repressor involved in choline regulation of the bet genes.
    
 0.474
SFK49271.1
methylmalonyl-CoA epimerase /ethylmalonyl-CoA epimerase.
     
  0.459
SFK28636.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
    
 0.434
SFK51298.1
Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
    
 0.434
SFL02829.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.434
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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