Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK47241.1 | SFL00693.1 | SAMN04488125_10284 | SAMN04488125_10789 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Transketolase; Belongs to the transketolase family. | 0.420 |
SFK47241.1 | SFL31573.1 | SAMN04488125_10284 | SAMN04488125_112156 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.892 |
SFK47241.1 | SFL60901.1 | SAMN04488125_10284 | SAMN04488125_1198 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.813 |
SFK47241.1 | SFL77821.1 | SAMN04488125_10284 | SAMN04488125_12442 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Phosphoglucomutase. | 0.651 |
SFK47241.1 | SFL83552.1 | SAMN04488125_10284 | SAMN04488125_12646 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.884 |
SFK47241.1 | edd | SAMN04488125_10284 | SAMN04488125_10285 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.995 |
SFK47241.1 | pgl | SAMN04488125_10284 | SAMN04488125_11293 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.637 |
SFK47241.1 | tal | SAMN04488125_10284 | SAMN04488125_12151 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.942 |
SFK47241.1 | zwf | SAMN04488125_10284 | SAMN04488125_103121 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.909 |
SFL00693.1 | SFK47241.1 | SAMN04488125_10789 | SAMN04488125_10284 | Transketolase; Belongs to the transketolase family. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.420 |
SFL00693.1 | SFL30103.1 | SAMN04488125_10789 | SAMN04488125_11294 | Transketolase; Belongs to the transketolase family. | 6-phosphogluconate dehydrogenase. | 0.429 |
SFL00693.1 | SFL31573.1 | SAMN04488125_10789 | SAMN04488125_112156 | Transketolase; Belongs to the transketolase family. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.936 |
SFL00693.1 | SFL60901.1 | SAMN04488125_10789 | SAMN04488125_1198 | Transketolase; Belongs to the transketolase family. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.950 |
SFL00693.1 | SFL77821.1 | SAMN04488125_10789 | SAMN04488125_12442 | Transketolase; Belongs to the transketolase family. | Phosphoglucomutase. | 0.925 |
SFL00693.1 | SFL83552.1 | SAMN04488125_10789 | SAMN04488125_12646 | Transketolase; Belongs to the transketolase family. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.757 |
SFL00693.1 | edd | SAMN04488125_10789 | SAMN04488125_10285 | Transketolase; Belongs to the transketolase family. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.677 |
SFL00693.1 | pgl | SAMN04488125_10789 | SAMN04488125_11293 | Transketolase; Belongs to the transketolase family. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.711 |
SFL00693.1 | tal | SAMN04488125_10789 | SAMN04488125_12151 | Transketolase; Belongs to the transketolase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.999 |
SFL00693.1 | zwf | SAMN04488125_10789 | SAMN04488125_103121 | Transketolase; Belongs to the transketolase family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.893 |
SFL30103.1 | SFL00693.1 | SAMN04488125_11294 | SAMN04488125_10789 | 6-phosphogluconate dehydrogenase. | Transketolase; Belongs to the transketolase family. | 0.429 |
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