STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK66693.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
SFK66583.1
NitT/TauT family transport system permease protein.
       0.749
SFK66609.1
NitT/TauT family transport system ATP-binding protein.
       0.749
SFK66637.1
Creatinine amidohydrolase.
       0.749
SFK66666.1
Glutamine synthetase.
       0.749
SFK66555.1
NitT/TauT family transport system substrate-binding protein.
       0.734
SFK66711.1
Hypothetical protein.
       0.541
SFK66736.1
Hypothetical protein.
       0.517
SFK66764.1
Urea carboxylase.
       0.517
SFK57432.1
Hypothetical protein.
  
    0.489
SFL05228.1
Hypothetical chaperone protein.
  
     0.410
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.