Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SFK67663.1Inner membrane protein. (208 aa)    
Predicted Functional Partners:
SFK27838.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
  
  0.896
SFK66102.1
Putative two-component system response regulator.
    
 0.879
SFL63377.1
Putative two-component system response regulator.
    
 0.879
SFL08466.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.830
SFL31573.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.784
SFL91058.1
Z1 domain-containing protein.
  
 
  0.758
SFK46649.1
TRAP-type uncharacterized transport system, substrate-binding protein.
  
     0.704
SFL43711.1
Adenylate cyclase.
 
 
 0.702
SFL75235.1
Protein of unknown function.
  
     0.678
SFK84770.1
Protein of unknown function.
  
     0.661
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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