STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK78991.1Large terminase phage packaging protein. (454 aa)    
Predicted Functional Partners:
SFK79019.1
Phage portal protein, HK97 family.
 
     0.910
SFK79052.1
Hypothetical protein.
 
     0.884
SFK79079.1
Phage major capsid protein, HK97 family.
 
     0.874
SFK79265.1
Phage tail tube protein, GTA-gp10.
 
    0.845
SFK79310.1
Phage tail tape measure protein, lambda family.
 
    0.808
SFK79242.1
Phage major tail protein, TP901-1 family.
 
     0.803
SFK79367.1
Phage conserved hypothetical protein BR0599.
 
     0.802
SFK79393.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
     0.801
SFK79464.1
Putative phage tail protein.
 
     0.800
SFK79336.1
TIGR02217 family protein.
 
     0.799
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.