Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SFK75868.1Uncharacterized membrane protein. (696 aa)    
Predicted Functional Partners:
SFK75843.1
N-terminal double-transmembrane domain-containing protein.
 
     0.913
SFK75815.1
Protein of unknown function DUF58.
 
     0.910
SFL41460.1
TIGR02302 family protein.
  
     0.774
SFK75790.1
MoxR-like ATPase.
 
     0.752
SFK75736.1
Hypothetical protein.
 
     0.552
SFK87444.1
Putative signal transducing protein.
  
     0.547
SFL50217.1
Protein of unknown function.
  
     0.544
SFK75662.1
tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.541
SFL52688.1
Tetratricopeptide repeat-containing protein.
 
     0.533
SFL49070.1
TPR repeat-containing protein.
 
     0.527
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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