STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL00449.1Aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family. (156 aa)    
Predicted Functional Partners:
SFL00428.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.995
SFK81546.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.939
SFK70347.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.938
SFK95013.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.932
SFL25222.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.932
SFL44446.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.922
SFL53862.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.897
SFK85570.1
Tat (twin-arginine translocation) pathway signal sequence.
 
 0.878
SFK70322.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 
 0.829
SFL44412.1
Xanthine dehydrogenase YagS FAD-binding subunit.
  
 0.828
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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