Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SFL06176.1CheY chemotaxis protein or a CheY-like REC (receiver) domain. (149 aa)    
Predicted Functional Partners:
SFL06145.1
PAS domain S-box-containing protein.
 
   
 0.892
SFL25170.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
  
 0.818
bchL
Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
   
  
 0.779
SFL11771.1
PAS domain S-box-containing protein.
 
   
 0.776
SFL38811.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
   
 0.774
SFK65544.1
PAS domain S-box-containing protein.
 
   
 0.767
SFK30812.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
   
 0.766
SFL74742.1
PAS domain S-box-containing protein.
 
   
 0.762
SFL25536.1
PAS domain S-box-containing protein.
 
  
 0.750
SFL11023.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
   
 0.740
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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