STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL07401.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (697 aa)    
Predicted Functional Partners:
SFL06486.1
PAS domain S-box-containing protein.
 
 0.992
SFK92251.1
PAS domain S-box-containing protein.
 
 0.990
SFK76788.1
PAS domain S-box-containing protein.
 
 0.989
SFL28865.1
PAS domain S-box-containing protein.
 
 0.989
SFL38841.1
PAS domain S-box-containing protein.
 
 0.988
SFL71628.1
PAS domain S-box-containing protein.
 
 0.988
SFK88657.1
PAS domain S-box-containing protein.
 
 0.987
SFK96075.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.986
SFK30257.1
PAS domain S-box-containing protein.
  
 0.965
SFK35843.1
PAS domain S-box-containing protein.
  
0.962
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.