Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK49556.1 | SFK65719.1 | SAMN04488125_102176 | SAMN04488125_103118 | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Aminopeptidase N. | 0.874 |
SFK49556.1 | SFK74862.1 | SAMN04488125_102176 | SAMN04488125_1047 | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.859 |
SFK49556.1 | SFL23604.1 | SAMN04488125_102176 | SAMN04488125_11142 | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.858 |
SFK49556.1 | gshB | SAMN04488125_102176 | SAMN04488125_102134 | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.865 |
SFK49556.1 | pepA | SAMN04488125_102176 | SAMN04488125_11523 | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.858 |
SFK65719.1 | SFK49556.1 | SAMN04488125_103118 | SAMN04488125_102176 | Aminopeptidase N. | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | 0.874 |
SFK65719.1 | SFK74862.1 | SAMN04488125_103118 | SAMN04488125_1047 | Aminopeptidase N. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.867 |
SFK65719.1 | SFK80155.1 | SAMN04488125_103118 | SAMN04488125_104200 | Aminopeptidase N. | Cysteine synthase A. | 0.711 |
SFK65719.1 | SFK94511.1 | SAMN04488125_103118 | SAMN04488125_106105 | Aminopeptidase N. | Cysteine synthase A. | 0.733 |
SFK65719.1 | SFL23604.1 | SAMN04488125_103118 | SAMN04488125_11142 | Aminopeptidase N. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.910 |
SFK65719.1 | glyA | SAMN04488125_103118 | SAMN04488125_109158 | Aminopeptidase N. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.750 |
SFK65719.1 | gshB | SAMN04488125_103118 | SAMN04488125_102134 | Aminopeptidase N. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.887 |
SFK65719.1 | pepA | SAMN04488125_103118 | SAMN04488125_11523 | Aminopeptidase N. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.898 |
SFK74862.1 | SFK49556.1 | SAMN04488125_1047 | SAMN04488125_102176 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | 0.859 |
SFK74862.1 | SFK65719.1 | SAMN04488125_1047 | SAMN04488125_103118 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Aminopeptidase N. | 0.867 |
SFK74862.1 | SFL23604.1 | SAMN04488125_1047 | SAMN04488125_11142 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.869 |
SFK74862.1 | gshB | SAMN04488125_1047 | SAMN04488125_102134 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.903 |
SFK74862.1 | pepA | SAMN04488125_1047 | SAMN04488125_11523 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.869 |
SFK80155.1 | SFK65719.1 | SAMN04488125_104200 | SAMN04488125_103118 | Cysteine synthase A. | Aminopeptidase N. | 0.711 |
SFK80155.1 | SFK94511.1 | SAMN04488125_104200 | SAMN04488125_106105 | Cysteine synthase A. | Cysteine synthase A. | 0.876 |
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