STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL24070.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (309 aa)    
Predicted Functional Partners:
SFL26890.1
HxxPF-repeated domain-containing protein.
  
 0.881
SFM04582.1
Acyl transferase domain-containing protein.
  
 0.879
SFK76165.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.846
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.763
SFK38837.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.761
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.753
SFL93294.1
Acyl transferase domain-containing protein.
  
 0.750
SFL58723.1
NAD(P)H-nitrite reductase, large subunit.
 
 
 0.742
SFL08466.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.719
SFL93324.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.704
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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