STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL24873.1Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. (122 aa)    
Predicted Functional Partners:
SFL26381.1
General stress protein 26.
  
    0.674
SFL07452.1
Uncharacterized membrane protein YtjA, UPF0391 family.
  
    0.642
SFL78231.1
Uncharacterized membrane protein YtjA, UPF0391 family.
  
    0.642
SFL78311.1
Protein of unknown function.
  
    0.642
SFL24850.1
Hypothetical protein.
       0.596
SFL24898.1
Hypothetical protein.
  
    0.582
SFL19227.1
Putative NADH-flavin reductase.
   
    0.495
SFL24791.1
PAS domain S-box-containing protein.
       0.447
SFK50679.1
Capsular polysaccharide transport system ATP-binding protein.
  
    0.413
SFL24929.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
       0.405
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.