Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFL30717.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (486 aa)    
Predicted Functional Partners:
SFL01296.1
Cell division protein FtsI (penicillin-binding protein 3).
 
 
 0.922
SFL77655.1
L,D-transpeptidase catalytic domain.
 
  
 0.852
SFK63640.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 0.849
SFL75648.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
 
  
 0.848
SFL77941.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
 
  
 0.848
SFL01123.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
 
  
 0.846
SFK69382.1
L,D-transpeptidase catalytic domain.
 
  
 0.845
SFK89169.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
 
  
 0.845
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
 
 0.833
SFL77492.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
 
  
 0.813
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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