Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFL33870.1Predicted arabinose efflux permease, MFS family. (450 aa)    
Predicted Functional Partners:
SFL33845.1
PRC-barrel domain-containing protein.
 
     0.943
SFL33896.1
ATP-binding cassette, subfamily B.
 
     0.822
SFL40191.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.558
SFL58723.1
NAD(P)H-nitrite reductase, large subunit.
     
 0.485
SFL16617.1
Fusaric acid resistance protein-like.
  
     0.459
SFL33824.1
Hypothetical protein.
       0.452
SFK39119.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
  0.427
SFL40721.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
  
  
  0.417
SFM09250.1
Methyltransferase domain-containing protein.
  
  
  0.413
SFM04091.1
Arsenite efflux membrane protein ArsB.
 
     0.410
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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