Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFL33409.1Chemotaxis protein MotB. (337 aa)    
Predicted Functional Partners:
SFL12207.1
Chemotaxis protein MotA.
 
 0.984
SFK64312.1
Chemotaxis protein MotA.
  
 0.981
SFL33390.1
MotA/TolQ/ExbB proton channel family protein.
 
     0.966
SFL41157.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
  
 0.892
SFK87220.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.857
SFK95051.1
Flagellar hook-associated protein 1 FlgK.
 
  
 0.842
SFK52321.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.816
SFK88717.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
  
 0.809
SFK66207.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
  
 0.807
SFL35178.1
Flagellar basal-body rod protein FlgC.
 
  
 0.801
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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