Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFL45916.1Amino acid ABC transporter substrate-binding protein, PAAT family. (303 aa)    
Predicted Functional Partners:
SFL45893.1
L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein.
 
 0.990
SFL45840.1
L-glutamate ABC transporter ATP-binding protein/L-aspartate ABC transporter ATP-binding protein.
 
 0.989
SFL45870.1
L-glutamate ABC transporter membrane protein.
 
 0.989
SFK88657.1
PAS domain S-box-containing protein.
   
 0.751
SFL38841.1
PAS domain S-box-containing protein.
   
 0.750
SFL71628.1
PAS domain S-box-containing protein.
   
 0.750
SFL06486.1
PAS domain S-box-containing protein.
   
 0.731
SFK30257.1
PAS domain S-box-containing protein.
    
 0.661
SFK76788.1
PAS domain S-box-containing protein.
   
 0.660
SFK92251.1
PAS domain S-box-containing protein.
   
 0.660
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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