Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFL49374.1Iron complex outermembrane recepter protein. (731 aa)    
Predicted Functional Partners:
SFK76418.1
PepSY-associated TM region.
 
  
 0.853
SFK34890.1
Iron complex outermembrane recepter protein.
  
  
 0.799
SFL26890.1
HxxPF-repeated domain-containing protein.
  
  
 0.777
SFM07481.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
 0.727
SFM07498.1
Non-ribosomal peptide synthetase component F.
  
  
 0.727
SFL05368.1
Predicted 2-oxoglutarate-and Fe(II)-dependent dioxygenase YbiX.
  
  
 0.725
SFK80299.1
Iron complex outermembrane recepter protein.
 
   
 0.697
SFL89168.1
Iron complex outermembrane recepter protein.
  
     0.682
SFL00522.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
 
  
  0.654
SFL89106.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.633
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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