Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFL50063.1Cellulose biosynthesis protein BcsQ. (299 aa)    
Predicted Functional Partners:
SFL39765.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.915
SFL56771.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.909
SFL50085.1
Hypothetical protein.
       0.857
SFL56745.1
Chromosome partitioning protein.
  
     0.772
SFL56669.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
 
 0.670
SFL56495.1
Chromosome segregation protein Spo0J, contains ParB-like nuclease domain.
  
 
 0.633
SFL56529.1
Chromosome partitioning protein, ParB family.
  
 
 0.633
SFL72101.1
Chromosome partitioning protein, ParB family.
  
 
 0.633
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
  
 0.614
SFK77593.1
Glycosyltransferase, GT2 family.
  
 
 0.566
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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