Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK29560.1 | SFK45297.1 | SAMN04488125_101141 | SAMN04488125_1028 | Mn-containing catalase (includes spore coat protein CotJC). | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.571 |
SFK29560.1 | SFK45350.1 | SAMN04488125_101141 | SAMN04488125_10210 | Mn-containing catalase (includes spore coat protein CotJC). | Glycosyltransferase involved in cell wall bisynthesis. | 0.520 |
SFK29560.1 | SFK74988.1 | SAMN04488125_101141 | SAMN04488125_10412 | Mn-containing catalase (includes spore coat protein CotJC). | UV-damage endonuclease. | 0.493 |
SFK29560.1 | SFK84644.1 | SAMN04488125_101141 | SAMN04488125_10518 | Mn-containing catalase (includes spore coat protein CotJC). | Glyoxylase, beta-lactamase superfamily II. | 0.665 |
SFK29560.1 | SFL51984.1 | SAMN04488125_101141 | SAMN04488125_11712 | Mn-containing catalase (includes spore coat protein CotJC). | Spore photoproduct lyase. | 0.623 |
SFK38697.1 | SFK45297.1 | SAMN04488125_101490 | SAMN04488125_1028 | 2'-5' RNA ligase superfamily protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.736 |
SFK38697.1 | SFK45350.1 | SAMN04488125_101490 | SAMN04488125_10210 | 2'-5' RNA ligase superfamily protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.651 |
SFK38697.1 | SFL50470.1 | SAMN04488125_101490 | SAMN04488125_116117 | 2'-5' RNA ligase superfamily protein. | Protein of unknown function. | 0.560 |
SFK38697.1 | SFL51984.1 | SAMN04488125_101490 | SAMN04488125_11712 | 2'-5' RNA ligase superfamily protein. | Spore photoproduct lyase. | 0.646 |
SFK45297.1 | SFK29560.1 | SAMN04488125_1028 | SAMN04488125_101141 | Ribosomal protein S12 methylthiotransferase accessory factor. | Mn-containing catalase (includes spore coat protein CotJC). | 0.571 |
SFK45297.1 | SFK38697.1 | SAMN04488125_1028 | SAMN04488125_101490 | Ribosomal protein S12 methylthiotransferase accessory factor. | 2'-5' RNA ligase superfamily protein. | 0.736 |
SFK45297.1 | SFK45350.1 | SAMN04488125_1028 | SAMN04488125_10210 | Ribosomal protein S12 methylthiotransferase accessory factor. | Glycosyltransferase involved in cell wall bisynthesis. | 0.952 |
SFK45297.1 | SFL50470.1 | SAMN04488125_1028 | SAMN04488125_116117 | Ribosomal protein S12 methylthiotransferase accessory factor. | Protein of unknown function. | 0.425 |
SFK45297.1 | SFL51984.1 | SAMN04488125_1028 | SAMN04488125_11712 | Ribosomal protein S12 methylthiotransferase accessory factor. | Spore photoproduct lyase. | 0.547 |
SFK45350.1 | SFK29560.1 | SAMN04488125_10210 | SAMN04488125_101141 | Glycosyltransferase involved in cell wall bisynthesis. | Mn-containing catalase (includes spore coat protein CotJC). | 0.520 |
SFK45350.1 | SFK38697.1 | SAMN04488125_10210 | SAMN04488125_101490 | Glycosyltransferase involved in cell wall bisynthesis. | 2'-5' RNA ligase superfamily protein. | 0.651 |
SFK45350.1 | SFK45297.1 | SAMN04488125_10210 | SAMN04488125_1028 | Glycosyltransferase involved in cell wall bisynthesis. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.952 |
SFK45350.1 | SFL51984.1 | SAMN04488125_10210 | SAMN04488125_11712 | Glycosyltransferase involved in cell wall bisynthesis. | Spore photoproduct lyase. | 0.516 |
SFK74988.1 | SFK29560.1 | SAMN04488125_10412 | SAMN04488125_101141 | UV-damage endonuclease. | Mn-containing catalase (includes spore coat protein CotJC). | 0.493 |
SFK74988.1 | SFK84644.1 | SAMN04488125_10412 | SAMN04488125_10518 | UV-damage endonuclease. | Glyoxylase, beta-lactamase superfamily II. | 0.555 |
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