Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SFL54342.1Flagellar protein FlaF. (116 aa)    
Predicted Functional Partners:
SFL54310.1
Flagellar protein FlbT.
 
  
 0.995
SFL54401.1
Flagellar hook-associated protein 1 FlgK.
 
  
 0.972
SFL54370.1
Flagellar hook-associated protein 3 FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.971
SFL54646.1
Flagellin N-terminal helical region.
 
  
 0.933
SFL99444.1
Flagellin N-terminal helical region.
 
  
 0.933
SFM00032.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.933
SFL50674.1
Flagellin C-terminal helical region.
 
  
 0.931
SFL54544.1
Protein of unknown function.
 
    0.908
SFL54068.1
Rod binding protein.
 
    0.907
SFL54274.1
Flagellar basal-body rod modification protein FlgD.
 
  
 0.906
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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