Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFL77333.1comF family protein. (254 aa)    
Predicted Functional Partners:
SFL00971.1
DNA processing protein.
 
 
 0.945
SFK84717.1
Competence protein ComEC.
 
  
 0.904
SFK64052.1
Magnesium chelatase family protein.
 
  
 0.850
SFK52321.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.824
SFL35178.1
Flagellar basal-body rod protein FlgC.
   
   0.824
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
    
  0.817
SFL77305.1
Hypothetical protein.
       0.813
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.812
SFL39930.1
Cyclohexadieny/prephenate dehydrogenase.
   
    0.801
SFL05786.1
N-acetylglucosamine-6-phosphate deacetylase.
  
    0.798
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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