Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFL77710.1Outer membrane immunogenic protein. (298 aa)    
Predicted Functional Partners:
SFL12714.1
Cell division and transport-associated protein TolA.
 
 0.812
SFK65314.1
Protein TonB.
 
 0.791
SFK37764.1
Chromosome segregation ATPase.
 
  
  0.784
SFL35574.1
Chemotaxis protein MotC.
  
 
 
 0.778
SFL41361.1
Hypothetical protein.
 
  
  0.769
SFK48116.1
Uncharacterized membrane protein.
  
     0.766
SFL62640.1
Hypothetical protein.
  
     0.765
SFL61461.1
Protein of unknown function.
  
     0.763
SFK46364.1
Hypothetical protein.
  
     0.761
SFK65426.1
Hypothetical protein.
  
     0.761
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.