STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL85569.1Hypothetical protein. (343 aa)    
Predicted Functional Partners:
SFK54887.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
   
 
 0.878
SFL49645.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
   
 
 0.878
SFL85590.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.478
SFL85521.1
Response regulator receiver domain-containing protein.
       0.426
SFL85548.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
       0.426
SFK52716.1
Deoxyribodipyrimidine photolyase-related protein.
  
     0.419
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.