Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFL89023.1Alcohol dehydrogenase (cytochrome c). (646 aa)    
Predicted Functional Partners:
SFL88937.1
Cytochrome c-550 PedF.
 
 0.931
SFK67101.1
Methanol dehydrogenase (cytochrome) small subunit; Catalyzes the oxidation of primary alcohols including methanol.
   
 0.927
SFL05562.1
Cytochrome c-550 PedF.
 
 0.890
SFL88807.1
Sulfur-oxidizing protein SoxY.
 
     0.851
SFL88776.1
Quinoprotein relay system zinc metallohydrolase 1.
 
     0.824
SFL05537.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.819
SFL05608.1
PQQ-dependent catabolism-associated beta-propeller protein.
 
 
  0.805
SFK57406.1
PQQ-dependent catabolism-associated beta-propeller protein.
 
 
  0.785
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 
 0.758
SFL05584.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-).
 
    0.756
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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