Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFL89261.1Iron complex outermembrane recepter protein. (740 aa)    
Predicted Functional Partners:
SFL89325.1
ABC-2 type transport system permease protein.
 
     0.826
SFL89457.1
ABC-2 type transport system permease protein.
 
     0.811
SFL89293.1
ABC-2 type transport system ATP-binding protein.
 
     0.801
SFL26890.1
HxxPF-repeated domain-containing protein.
  
  
 0.777
SFM07498.1
Non-ribosomal peptide synthetase component F.
 
  
 0.768
SFM07481.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
  
 0.763
SFL89494.1
Uncharacterized membrane protein.
 
     0.744
SFL05368.1
Predicted 2-oxoglutarate-and Fe(II)-dependent dioxygenase YbiX.
  
  
 0.725
SFL00522.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
    
  0.608
SFL89197.1
FecR family protein.
 
  
 0.605
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.