Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFL89526.1Vitamin B12 transporter. (666 aa)    
Predicted Functional Partners:
SFL89560.1
Iron complex transport system substrate-binding protein.
 
  
 0.950
SFL89595.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.928
SFL89626.1
Iron complex transport system ATP-binding protein.
 
  
 0.894
SFL89658.1
Hypothetical protein.
 
     0.858
SFK35598.1
TonB family C-terminal domain-containing protein.
  
 0.787
SFK65314.1
Protein TonB.
  
 0.787
SFK70828.1
TonB family C-terminal domain-containing protein.
  
 0.787
SFK95725.1
TonB family C-terminal domain-containing protein.
  
 0.787
SFL12714.1
Cell division and transport-associated protein TolA.
  
 0.787
SFL89701.1
Predicted kinase.
       0.782
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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