STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL93141.1Hypothetical protein. (654 aa)    
Predicted Functional Partners:
SFL93178.1
ATP-binding cassette, subfamily C.
 
     0.917
SFL93052.1
Hypothetical protein.
 
     0.836
SFL93208.1
HlyD family secretion protein.
 
     0.801
SFL80093.1
Phage integrase family protein.
  
     0.648
SFL93113.1
Hypothetical protein.
       0.544
SFL54009.1
Hypothetical protein.
  
     0.456
SFL54068.1
Rod binding protein.
  
     0.452
SFL54041.1
Hypothetical protein.
  
     0.445
SFL35515.1
Hypothetical protein.
  
     0.444
SFL35687.1
Hypothetical protein.
  
     0.443
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.